Cluster: HRGMv2_3204_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3204
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3204_9 | HRGMv2_3204_9_29 | 38017 | 39897 | - | 3.A.3.6.16 |
| pfam | HRGMv2_3204_9 | HRGMv2_3204_9_30 | 40046 | 40318 | - | Trns_repr_metal |
| CAZyme | HRGMv2_3204_9 | HRGMv2_3204_9_31 | 40626 | 41963 | + | GH1 |
| peptidase | HRGMv2_3204_9 | HRGMv2_3204_9_32 | 42002 | 42979 | + | C59.951 |
| TC | HRGMv2_3204_9 | HRGMv2_3204_9_33 | 43027 | 45762 | - | 9.B.144.1.5 |
Gene ID: HRGMv2_3204_9_29
Type: TC
Location: 38017 - 39897 (-)
Type: TC
Location: 38017 - 39897 (-)
Gene ID: HRGMv2_3204_9_30
Type: pfam
Location: 40046 - 40318 (-)
Type: pfam
Location: 40046 - 40318 (-)
Gene ID: HRGMv2_3204_9_31
Type: CAZyme
Location: 40626 - 41963 (+)
Type: CAZyme
Location: 40626 - 41963 (+)
Gene ID: HRGMv2_3204_9_32
Type: peptidase
Location: 42002 - 42979 (+)
Type: peptidase
Location: 42002 - 42979 (+)
Gene ID: HRGMv2_3204_9_33
Type: TC
Location: 43027 - 45762 (-)
Type: TC
Location: 43027 - 45762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.