Cluster: HRGMv2_3204_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3204
- CGC Family ID: CGCFAM_00056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3204_9 | HRGMv2_3204_9_5 | 6418 | 7611 | + | GH5_4 |
| STP | HRGMv2_3204_9 | HRGMv2_3204_9_6 | 7650 | 9341 | - | HATPase_c | HisKA |
| TF | HRGMv2_3204_9 | HRGMv2_3204_9_7 | 9374 | 10051 | - | Trans_reg_C |
| TC | HRGMv2_3204_9 | HRGMv2_3204_9_8 | 10084 | 11859 | - | 2.A.58.2.2 |
| pfam | HRGMv2_3204_9 | HRGMv2_3204_9_9 | 12023 | 12682 | - | PhoU | PhoU |
| TC | HRGMv2_3204_9 | HRGMv2_3204_9_10 | 12698 | 13453 | - | 3.A.1.7.5 |
| TC | HRGMv2_3204_9 | HRGMv2_3204_9_11 | 13454 | 14302 | - | 3.A.1.7.5 |
| TC | HRGMv2_3204_9 | HRGMv2_3204_9_12 | 14312 | 15250 | - | 3.A.1.7.5 |
Gene ID: HRGMv2_3204_9_5
Type: CAZyme
Location: 6418 - 7611 (+)
Type: CAZyme
Location: 6418 - 7611 (+)
Gene ID: HRGMv2_3204_9_6
Type: STP
Location: 7650 - 9341 (-)
Type: STP
Location: 7650 - 9341 (-)
Gene ID: HRGMv2_3204_9_7
Type: TF
Location: 9374 - 10051 (-)
Type: TF
Location: 9374 - 10051 (-)
Gene ID: HRGMv2_3204_9_8
Type: TC
Location: 10084 - 11859 (-)
Type: TC
Location: 10084 - 11859 (-)
Gene ID: HRGMv2_3204_9_9
Type: pfam
Location: 12023 - 12682 (-)
Type: pfam
Location: 12023 - 12682 (-)
Gene ID: HRGMv2_3204_9_10
Type: TC
Location: 12698 - 13453 (-)
Type: TC
Location: 12698 - 13453 (-)
Gene ID: HRGMv2_3204_9_11
Type: TC
Location: 13454 - 14302 (-)
Type: TC
Location: 13454 - 14302 (-)
Gene ID: HRGMv2_3204_9_12
Type: TC
Location: 14312 - 15250 (-)
Type: TC
Location: 14312 - 15250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.