Cluster: HRGMv2_3204_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3204
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3204_7 | HRGMv2_3204_7_52 | 54575 | 55465 | - | 8.A.3.2.2 |
| pfam | HRGMv2_3204_7 | HRGMv2_3204_7_53 | 55822 | 57120 | - | fn3 | Big_2 |
| pfam | HRGMv2_3204_7 | HRGMv2_3204_7_54 | 57311 | 57772 | + | DUF4830 |
| CAZyme | HRGMv2_3204_7 | HRGMv2_3204_7_55 | 57818 | 59068 | - | GH5_10 |
| NULL(UNKNOWN) | HRGMv2_3204_7 | HRGMv2_3204_7_56 | 59384 | 60040 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3204_7 | HRGMv2_3204_7_57 | 60110 | 62737 | + | 3.A.9.1.2 |
| TC | HRGMv2_3204_7 | HRGMv2_3204_7_58 | 62798 | 63964 | - | 2.A.86.1.8 |
Gene ID: HRGMv2_3204_7_52
Type: TC
Location: 54575 - 55465 (-)
Type: TC
Location: 54575 - 55465 (-)
Gene ID: HRGMv2_3204_7_53
Type: pfam
Location: 55822 - 57120 (-)
Type: pfam
Location: 55822 - 57120 (-)
Gene ID: HRGMv2_3204_7_54
Type: pfam
Location: 57311 - 57772 (+)
Type: pfam
Location: 57311 - 57772 (+)
Gene ID: HRGMv2_3204_7_55
Type: CAZyme
Location: 57818 - 59068 (-)
Type: CAZyme
Location: 57818 - 59068 (-)
Gene ID: HRGMv2_3204_7_56
Type:
Location: 59384 - 60040 (+)
Type:
Location: 59384 - 60040 (+)
Gene ID: HRGMv2_3204_7_57
Type: TC
Location: 60110 - 62737 (+)
Type: TC
Location: 60110 - 62737 (+)
Gene ID: HRGMv2_3204_7_58
Type: TC
Location: 62798 - 63964 (-)
Type: TC
Location: 62798 - 63964 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.