Cluster: HRGMv2_3203_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3203
- CGC Family ID: CGCFAM_02975
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3203_7 | HRGMv2_3203_7_10 | 12904 | 14346 | + | CE4 |
| pfam | HRGMv2_3203_7 | HRGMv2_3203_7_11 | 14389 | 14826 | - | RNase_H |
| pfam | HRGMv2_3203_7 | HRGMv2_3203_7_12 | 14939 | 15697 | - | R3H | KH_KhpA-B | Jag_N |
| TC | HRGMv2_3203_7 | HRGMv2_3203_7_13 | 15721 | 17247 | - | 2.A.9.3.7 |
Gene ID: HRGMv2_3203_7_10
Type: CAZyme
Location: 12904 - 14346 (+)
Type: CAZyme
Location: 12904 - 14346 (+)
Gene ID: HRGMv2_3203_7_11
Type: pfam
Location: 14389 - 14826 (-)
Type: pfam
Location: 14389 - 14826 (-)
Gene ID: HRGMv2_3203_7_12
Type: pfam
Location: 14939 - 15697 (-)
Type: pfam
Location: 14939 - 15697 (-)
Gene ID: HRGMv2_3203_7_13
Type: TC
Location: 15721 - 17247 (-)
Type: TC
Location: 15721 - 17247 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UMGS1766
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.