Cluster: HRGMv2_3203_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3203
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3203_6 | HRGMv2_3203_6_38 | 42805 | 43953 | - | GH3 |
| pfam | HRGMv2_3203_6 | HRGMv2_3203_6_39 | 44034 | 44297 | - | Trns_repr_metal |
| TC | HRGMv2_3203_6 | HRGMv2_3203_6_40 | 44294 | 46837 | - | 3.A.3.5.15 |
| pfam | HRGMv2_3203_6 | HRGMv2_3203_6_41 | 46957 | 47184 | - | DUF378 |
| TC | HRGMv2_3203_6 | HRGMv2_3203_6_42 | 47316 | 48644 | + | 2.A.66.1.45 |
Gene ID: HRGMv2_3203_6_38
Type: CAZyme
Location: 42805 - 43953 (-)
Type: CAZyme
Location: 42805 - 43953 (-)
Gene ID: HRGMv2_3203_6_39
Type: pfam
Location: 44034 - 44297 (-)
Type: pfam
Location: 44034 - 44297 (-)
Gene ID: HRGMv2_3203_6_40
Type: TC
Location: 44294 - 46837 (-)
Type: TC
Location: 44294 - 46837 (-)
Gene ID: HRGMv2_3203_6_41
Type: pfam
Location: 46957 - 47184 (-)
Type: pfam
Location: 46957 - 47184 (-)
Gene ID: HRGMv2_3203_6_42
Type: TC
Location: 47316 - 48644 (+)
Type: TC
Location: 47316 - 48644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UMGS1766
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.