Cluster: HRGMv2_3203_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3203
- CGC Family ID: CGCFAM_03147
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3203_25 | HRGMv2_3203_25_4 | 1664 | 2773 | - | 3.A.1.2.10 |
| TC | HRGMv2_3203_25 | HRGMv2_3203_25_5 | 2766 | 4310 | - | 3.A.1.2.17 |
| pfam | HRGMv2_3203_25 | HRGMv2_3203_25_6 | 4671 | 5972 | - | Bmp |
| NULL(UNKNOWN) | HRGMv2_3203_25 | HRGMv2_3203_25_7 | 6119 | 6934 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3203_25 | HRGMv2_3203_25_8 | 6968 | 9493 | - | GT2 | GT2 |
Gene ID: HRGMv2_3203_25_4
Type: TC
Location: 1664 - 2773 (-)
Type: TC
Location: 1664 - 2773 (-)
Gene ID: HRGMv2_3203_25_5
Type: TC
Location: 2766 - 4310 (-)
Type: TC
Location: 2766 - 4310 (-)
Gene ID: HRGMv2_3203_25_6
Type: pfam
Location: 4671 - 5972 (-)
Type: pfam
Location: 4671 - 5972 (-)
Gene ID: HRGMv2_3203_25_7
Type:
Location: 6119 - 6934 (-)
Type:
Location: 6119 - 6934 (-)
Gene ID: HRGMv2_3203_25_8
Type: CAZyme
Location: 6968 - 9493 (-)
Type: CAZyme
Location: 6968 - 9493 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UMGS1766
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.