Cluster: HRGMv2_3203_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3203
- CGC Family ID: CGCFAM_01524
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3203_14 | HRGMv2_3203_14_35 | 31543 | 34968 | - | 3.B.1.1.6 |
| TF | HRGMv2_3203_14 | HRGMv2_3203_14_36 | 35302 | 35982 | + | Trans_reg_C |
| STP | HRGMv2_3203_14 | HRGMv2_3203_14_37 | 35979 | 36968 | + | HATPase_c |
| TC | HRGMv2_3203_14 | HRGMv2_3203_14_38 | 37093 | 37857 | + | 3.A.1.134.4 |
| TC | HRGMv2_3203_14 | HRGMv2_3203_14_39 | 37854 | 39863 | + | 3.A.1.134.4 |
| peptidase | HRGMv2_3203_14 | HRGMv2_3203_14_40 | 39938 | 40996 | - | S55.001 |
| CAZyme | HRGMv2_3203_14 | HRGMv2_3203_14_41 | 41183 | 42259 | - | GT2 |
Gene ID: HRGMv2_3203_14_35
Type: TC
Location: 31543 - 34968 (-)
Type: TC
Location: 31543 - 34968 (-)
Gene ID: HRGMv2_3203_14_36
Type: TF
Location: 35302 - 35982 (+)
Type: TF
Location: 35302 - 35982 (+)
Gene ID: HRGMv2_3203_14_37
Type: STP
Location: 35979 - 36968 (+)
Type: STP
Location: 35979 - 36968 (+)
Gene ID: HRGMv2_3203_14_38
Type: TC
Location: 37093 - 37857 (+)
Type: TC
Location: 37093 - 37857 (+)
Gene ID: HRGMv2_3203_14_39
Type: TC
Location: 37854 - 39863 (+)
Type: TC
Location: 37854 - 39863 (+)
Gene ID: HRGMv2_3203_14_40
Type: peptidase
Location: 39938 - 40996 (-)
Type: peptidase
Location: 39938 - 40996 (-)
Gene ID: HRGMv2_3203_14_41
Type: CAZyme
Location: 41183 - 42259 (-)
Type: CAZyme
Location: 41183 - 42259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UMGS1766
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.