Cluster: HRGMv2_3203_CGC13
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3203
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3203_11 | HRGMv2_3203_11_46 | 51273 | 53972 | + | 4.A.2.1.17 |
| sulfatase | HRGMv2_3203_11 | HRGMv2_3203_11_47 | 54177 | 55769 | - | S1_97 |
| pfam | HRGMv2_3203_11 | HRGMv2_3203_11_48 | 55817 | 56761 | - | SBF | Mem_trans |
| TC | HRGMv2_3203_11 | HRGMv2_3203_11_49 | 56782 | 57126 | - | 2.A.78.1.1 |
| TC | HRGMv2_3203_11 | HRGMv2_3203_11_50 | 57123 | 57839 | - | 2.A.78.1.1 |
| CAZyme | HRGMv2_3203_11 | HRGMv2_3203_11_51 | 58286 | 59563 | + | GT2 |
| pfam | HRGMv2_3203_11 | HRGMv2_3203_11_52 | 59643 | 60377 | - | adh_short | KR | adh_short_C2 |
| pfam | HRGMv2_3203_11 | HRGMv2_3203_11_53 | 60650 | 62716 | + | GTP_EFTU | EFG_C | GTP_EFTU_D2 | EFG_IV | EFG_III | EF-G_D2 |
| TC | HRGMv2_3203_11 | HRGMv2_3203_11_54 | 62779 | 63663 | - | 2.A.115.1.1 |
| pfam | HRGMv2_3203_11 | HRGMv2_3203_11_55 | 63803 | 64342 | + | dUTPase | DCD_N | DCD |
| pfam | HRGMv2_3203_11 | HRGMv2_3203_11_56 | 64532 | 65134 | - | ABC2_membrane_5 |
| TC | HRGMv2_3203_11 | HRGMv2_3203_11_57 | 65131 | 65982 | - | 3.A.1.149.1 |
| TF | HRGMv2_3203_11 | HRGMv2_3203_11_58 | 65979 | 66359 | - | GntR |
| TC | HRGMv2_3203_11 | HRGMv2_3203_11_59 | 66554 | 67585 | + | 1.A.33.1.5 |
| pfam | HRGMv2_3203_11 | HRGMv2_3203_11_60 | 67923 | 68924 | - | AsnA |
| TC | HRGMv2_3203_11 | HRGMv2_3203_11_61 | 69048 | 70826 | + | 3.A.1.106.2 |
Gene ID: HRGMv2_3203_11_46
Type: TC
Location: 51273 - 53972 (+)
Type: TC
Location: 51273 - 53972 (+)
Gene ID: HRGMv2_3203_11_47
Type: sulfatase
Location: 54177 - 55769 (-)
Type: sulfatase
Location: 54177 - 55769 (-)
Gene ID: HRGMv2_3203_11_48
Type: pfam
Location: 55817 - 56761 (-)
Type: pfam
Location: 55817 - 56761 (-)
Gene ID: HRGMv2_3203_11_49
Type: TC
Location: 56782 - 57126 (-)
Type: TC
Location: 56782 - 57126 (-)
Gene ID: HRGMv2_3203_11_50
Type: TC
Location: 57123 - 57839 (-)
Type: TC
Location: 57123 - 57839 (-)
Gene ID: HRGMv2_3203_11_51
Type: CAZyme
Location: 58286 - 59563 (+)
Type: CAZyme
Location: 58286 - 59563 (+)
Gene ID: HRGMv2_3203_11_52
Type: pfam
Location: 59643 - 60377 (-)
Type: pfam
Location: 59643 - 60377 (-)
Gene ID: HRGMv2_3203_11_53
Type: pfam
Location: 60650 - 62716 (+)
Type: pfam
Location: 60650 - 62716 (+)
Gene ID: HRGMv2_3203_11_54
Type: TC
Location: 62779 - 63663 (-)
Type: TC
Location: 62779 - 63663 (-)
Gene ID: HRGMv2_3203_11_55
Type: pfam
Location: 63803 - 64342 (+)
Type: pfam
Location: 63803 - 64342 (+)
Gene ID: HRGMv2_3203_11_56
Type: pfam
Location: 64532 - 65134 (-)
Type: pfam
Location: 64532 - 65134 (-)
Gene ID: HRGMv2_3203_11_57
Type: TC
Location: 65131 - 65982 (-)
Type: TC
Location: 65131 - 65982 (-)
Gene ID: HRGMv2_3203_11_58
Type: TF
Location: 65979 - 66359 (-)
Type: TF
Location: 65979 - 66359 (-)
Gene ID: HRGMv2_3203_11_59
Type: TC
Location: 66554 - 67585 (+)
Type: TC
Location: 66554 - 67585 (+)
Gene ID: HRGMv2_3203_11_60
Type: pfam
Location: 67923 - 68924 (-)
Type: pfam
Location: 67923 - 68924 (-)
Gene ID: HRGMv2_3203_11_61
Type: TC
Location: 69048 - 70826 (+)
Type: TC
Location: 69048 - 70826 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UMGS1766
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.