Cluster: HRGMv2_3203_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3203
- CGC Family ID: CGCFAM_01127
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3203_10 | HRGMv2_3203_10_7 | 5343 | 7148 | - | 3.A.1.135.6 |
| TC | HRGMv2_3203_10 | HRGMv2_3203_10_8 | 7163 | 8923 | - | 3.A.1.135.6 |
| TF | HRGMv2_3203_10 | HRGMv2_3203_10_9 | 8920 | 9366 | - | 0040517 |
| NULL(UNKNOWN) | HRGMv2_3203_10 | HRGMv2_3203_10_10 | 9780 | 10115 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3203_10 | HRGMv2_3203_10_11 | 10281 | 11303 | + | GT2 |
Gene ID: HRGMv2_3203_10_7
Type: TC
Location: 5343 - 7148 (-)
Type: TC
Location: 5343 - 7148 (-)
Gene ID: HRGMv2_3203_10_8
Type: TC
Location: 7163 - 8923 (-)
Type: TC
Location: 7163 - 8923 (-)
Gene ID: HRGMv2_3203_10_9
Type: TF
Location: 8920 - 9366 (-)
Type: TF
Location: 8920 - 9366 (-)
Gene ID: HRGMv2_3203_10_10
Type:
Location: 9780 - 10115 (-)
Type:
Location: 9780 - 10115 (-)
Gene ID: HRGMv2_3203_10_11
Type: CAZyme
Location: 10281 - 11303 (+)
Type: CAZyme
Location: 10281 - 11303 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UMGS1766
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.