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Cluster: HRGMv2_3203_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3203_9 HRGMv2_3203_9_11 11855 14275 - GT35
CAZyme HRGMv2_3203_9 HRGMv2_3203_9_12 14547 15989 - GT5
pfam HRGMv2_3203_9 HRGMv2_3203_9_13 16010 17113 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3203_9 HRGMv2_3203_9_14 17110 18321 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3203_9 HRGMv2_3203_9_15 18376 20352 - CBM48 | GH13_9
CAZyme HRGMv2_3203_9 HRGMv2_3203_9_16 20593 21357 + CE4
NULL(UNKNOWN) HRGMv2_3203_9 HRGMv2_3203_9_17 21523 21825 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3203_9 HRGMv2_3203_9_18 21822 23582 - 1.A.33.1.4
Gene ID: HRGMv2_3203_9_11
Type: CAZyme
Location: 11855 - 14275 (-)
Gene ID: HRGMv2_3203_9_12
Type: CAZyme
Location: 14547 - 15989 (-)
Gene ID: HRGMv2_3203_9_13
Type: pfam
Location: 16010 - 17113 (-)
Gene ID: HRGMv2_3203_9_14
Type: pfam
Location: 17110 - 18321 (-)
Gene ID: HRGMv2_3203_9_15
Type: CAZyme
Location: 18376 - 20352 (-)
Gene ID: HRGMv2_3203_9_16
Type: CAZyme
Location: 20593 - 21357 (+)
Gene ID: HRGMv2_3203_9_17
Type:
Location: 21523 - 21825 (-)
Gene ID: HRGMv2_3203_9_18
Type: TC
Location: 21822 - 23582 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
UMGS1766
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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