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Cluster: HRGMv2_3202_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3202_6 HRGMv2_3202_6_70 72865 74610 + 3.A.1.117.3
TC HRGMv2_3202_6 HRGMv2_3202_6_71 74607 76313 + 3.A.1.117.3
pfam HRGMv2_3202_6 HRGMv2_3202_6_72 76453 77157 + SnoaL_4
CAZyme HRGMv2_3202_6 HRGMv2_3202_6_73 77330 79846 + GH3
CAZyme HRGMv2_3202_6 HRGMv2_3202_6_74 79860 82079 + GH3
STP HRGMv2_3202_6 HRGMv2_3202_6_75 82211 83452 + HTH_18
pfam HRGMv2_3202_6 HRGMv2_3202_6_76 83632 84741 + Lipoprotein_Ltp | Lipoprotein_Ltp
TC HRGMv2_3202_6 HRGMv2_3202_6_77 84791 86443 - 4.C.1.1.6
TC HRGMv2_3202_6 HRGMv2_3202_6_78 86631 87998 + 2.A.66.1.32
Gene ID: HRGMv2_3202_6_70
Type: TC
Location: 72865 - 74610 (+)
Gene ID: HRGMv2_3202_6_71
Type: TC
Location: 74607 - 76313 (+)
Gene ID: HRGMv2_3202_6_72
Type: pfam
Location: 76453 - 77157 (+)
Gene ID: HRGMv2_3202_6_73
Type: CAZyme
Location: 77330 - 79846 (+)
Gene ID: HRGMv2_3202_6_74
Type: CAZyme
Location: 79860 - 82079 (+)
Gene ID: HRGMv2_3202_6_75
Type: STP
Location: 82211 - 83452 (+)
Gene ID: HRGMv2_3202_6_76
Type: pfam
Location: 83632 - 84741 (+)
Gene ID: HRGMv2_3202_6_77
Type: TC
Location: 84791 - 86443 (-)
Gene ID: HRGMv2_3202_6_78
Type: TC
Location: 86631 - 87998 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
HGM13006
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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