Cluster: HRGMv2_3202_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3202
- CGC Family ID: CGCFAM_03800
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3202_3 | HRGMv2_3202_3_39 | 52123 | 53487 | + | 1.A.26.1.2 |
| NULL(UNKNOWN) | HRGMv2_3202_3 | HRGMv2_3202_3_40 | 53634 | 53876 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3202_3 | HRGMv2_3202_3_41 | 54146 | 55693 | + | HD |
| CAZyme | HRGMv2_3202_3 | HRGMv2_3202_3_42 | 55766 | 58699 | - | GH106 |
Gene ID: HRGMv2_3202_3_39
Type: TC
Location: 52123 - 53487 (+)
Type: TC
Location: 52123 - 53487 (+)
Gene ID: HRGMv2_3202_3_40
Type:
Location: 53634 - 53876 (+)
Type:
Location: 53634 - 53876 (+)
Gene ID: HRGMv2_3202_3_41
Type: STP
Location: 54146 - 55693 (+)
Type: STP
Location: 54146 - 55693 (+)
Gene ID: HRGMv2_3202_3_42
Type: CAZyme
Location: 55766 - 58699 (-)
Type: CAZyme
Location: 55766 - 58699 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3202_3_39 | vegetarian > vegan | 1.47435 | 0.00441 |