Cluster: HRGMv2_3202_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3202
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3202_12 | HRGMv2_3202_12_52 | 56274 | 58973 | - | CBM67 | GH78 |
| peptidase | HRGMv2_3202_12 | HRGMv2_3202_12_53 | 59069 | 60010 | - | S09.UPW |
| TC | HRGMv2_3202_12 | HRGMv2_3202_12_54 | 60306 | 61541 | + | 2.A.36.2.1 |
| pfam | HRGMv2_3202_12 | HRGMv2_3202_12_55 | 61795 | 62433 | + | DUF6796 |
| NULL(UNKNOWN) | HRGMv2_3202_12 | HRGMv2_3202_12_56 | 62588 | 63103 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3202_12 | HRGMv2_3202_12_57 | 63191 | 65854 | - | 2.A.21.9.1 |
Gene ID: HRGMv2_3202_12_52
Type: CAZyme
Location: 56274 - 58973 (-)
Type: CAZyme
Location: 56274 - 58973 (-)
Gene ID: HRGMv2_3202_12_53
Type: peptidase
Location: 59069 - 60010 (-)
Type: peptidase
Location: 59069 - 60010 (-)
Gene ID: HRGMv2_3202_12_54
Type: TC
Location: 60306 - 61541 (+)
Type: TC
Location: 60306 - 61541 (+)
Gene ID: HRGMv2_3202_12_55
Type: pfam
Location: 61795 - 62433 (+)
Type: pfam
Location: 61795 - 62433 (+)
Gene ID: HRGMv2_3202_12_56
Type:
Location: 62588 - 63103 (-)
Type:
Location: 62588 - 63103 (-)
Gene ID: HRGMv2_3202_12_57
Type: TC
Location: 63191 - 65854 (-)
Type: TC
Location: 63191 - 65854 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.