dbCAN HGM

Cluster: HRGMv2_3202_CGC12

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_3202_11	HRGMv2_3202_11_43	49405	51963	-	GH3
STP	HRGMv2_3202_11	HRGMv2_3202_11_44	52098	52532	-	CBS \| CBS
STP	HRGMv2_3202_11	HRGMv2_3202_11_45	52711	53994	-	Aminotran_1_2
TC	HRGMv2_3202_11	HRGMv2_3202_11_46	54672	55331	+	3.A.1.3.2
TC	HRGMv2_3202_11	HRGMv2_3202_11_47	55312	55998	+	3.A.1.3.8
TC	HRGMv2_3202_11	HRGMv2_3202_11_48	55991	56755	+	3.A.1.3.14
TC	HRGMv2_3202_11	HRGMv2_3202_11_49	57006	57911	+	3.A.1.3.10
pfam	HRGMv2_3202_11	HRGMv2_3202_11_50	57984	58667	-	Hydrolase \| Hydrolase_like \| HAD_2
TC	HRGMv2_3202_11	HRGMv2_3202_11_51	58664	60058	-	2.A.66.1.33

Gene ID: HRGMv2_3202_11_43
Type: CAZyme
Location: 49405 - 51963 (-)

Gene ID: HRGMv2_3202_11_44
Type: STP
Location: 52098 - 52532 (-)

Gene ID: HRGMv2_3202_11_45
Type: STP
Location: 52711 - 53994 (-)

Gene ID: HRGMv2_3202_11_46
Type: TC
Location: 54672 - 55331 (+)

Gene ID: HRGMv2_3202_11_47
Type: TC
Location: 55312 - 55998 (+)

Gene ID: HRGMv2_3202_11_48
Type: TC
Location: 55991 - 56755 (+)

Gene ID: HRGMv2_3202_11_49
Type: TC
Location: 57006 - 57911 (+)

Gene ID: HRGMv2_3202_11_50
Type: pfam
Location: 57984 - 58667 (-)

Gene ID: HRGMv2_3202_11_51
Type: TC
Location: 58664 - 60058 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_3202_11_44	vegetarian > omnivore	1.44075	0.00694
HRGMv2_3202_11_44	vegetarian > vegan	3.67130	0.00441
HRGMv2_3202_11_48	vegan > omnivore	1.03830	0.03783
HRGMv2_3202_11_51	vegetarian > vegan	1.78422	0.00441