Cluster: HRGMv2_3202_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3202
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3202_10 | HRGMv2_3202_10_45 | 48928 | 50859 | - | GT39 |
| pfam | HRGMv2_3202_10 | HRGMv2_3202_10_46 | 50956 | 51921 | - | PseudoU_synth_2 | S4 |
| TC | HRGMv2_3202_10 | HRGMv2_3202_10_47 | 51949 | 53295 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_3202_10_45
Type: CAZyme
Location: 48928 - 50859 (-)
Type: CAZyme
Location: 48928 - 50859 (-)
Gene ID: HRGMv2_3202_10_46
Type: pfam
Location: 50956 - 51921 (-)
Type: pfam
Location: 50956 - 51921 (-)
Gene ID: HRGMv2_3202_10_47
Type: TC
Location: 51949 - 53295 (-)
Type: TC
Location: 51949 - 53295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.