Cluster: HRGMv2_3202_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3202
- CGC Family ID: CGCFAM_00681
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3202_9 | HRGMv2_3202_9_12 | 19304 | 22225 | - | GH3 |
| CAZyme | HRGMv2_3202_9 | HRGMv2_3202_9_13 | 22222 | 24633 | - | GH3 |
| CAZyme | HRGMv2_3202_9 | HRGMv2_3202_9_14 | 24704 | 27106 | - | GH39 |
| TC | HRGMv2_3202_9 | HRGMv2_3202_9_15 | 27278 | 28984 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_3202_9_12
Type: CAZyme
Location: 19304 - 22225 (-)
Type: CAZyme
Location: 19304 - 22225 (-)
Gene ID: HRGMv2_3202_9_13
Type: CAZyme
Location: 22222 - 24633 (-)
Type: CAZyme
Location: 22222 - 24633 (-)
Gene ID: HRGMv2_3202_9_14
Type: CAZyme
Location: 24704 - 27106 (-)
Type: CAZyme
Location: 24704 - 27106 (-)
Gene ID: HRGMv2_3202_9_15
Type: TC
Location: 27278 - 28984 (+)
Type: TC
Location: 27278 - 28984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.