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Cluster: HRGMv2_3197_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3197_28 HRGMv2_3197_28_1 2 343 + 4.A.2.1.17
NULL(UNKNOWN) HRGMv2_3197_28 HRGMv2_3197_28_2 407 937 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3197_28 HRGMv2_3197_28_3 1134 2249 - CE9
sulfatase HRGMv2_3197_28 HRGMv2_3197_28_4 2269 3000 - S1_9
TC HRGMv2_3197_28 HRGMv2_3197_28_5 3173 4636 - 4.A.1.1.7
STP HRGMv2_3197_28 HRGMv2_3197_28_6 4777 5034 - PTS-HPr
TC HRGMv2_3197_28 HRGMv2_3197_28_7 5059 5556 - 4.A.1.2.11
TC HRGMv2_3197_28 HRGMv2_3197_28_8 5802 6560 - 9.B.158.1.1
Gene ID: HRGMv2_3197_28_1
Type: TC
Location: 2 - 343 (+)
Gene ID: HRGMv2_3197_28_2
Type:
Location: 407 - 937 (-)
Gene ID: HRGMv2_3197_28_3
Type: CAZyme
Location: 1134 - 2249 (-)
Gene ID: HRGMv2_3197_28_4
Type: sulfatase
Location: 2269 - 3000 (-)
Gene ID: HRGMv2_3197_28_5
Type: TC
Location: 3173 - 4636 (-)
Gene ID: HRGMv2_3197_28_6
Type: STP
Location: 4777 - 5034 (-)
Gene ID: HRGMv2_3197_28_7
Type: TC
Location: 5059 - 5556 (-)
Gene ID: HRGMv2_3197_28_8
Type: TC
Location: 5802 - 6560 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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