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Cluster: HRGMv2_3197_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3197_2 HRGMv2_3197_2_65 64247 65749 - GH77
pfam HRGMv2_3197_2 HRGMv2_3197_2_66 65907 67856 - SLH | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep
pfam HRGMv2_3197_2 HRGMv2_3197_2_67 68125 68784 + Methyltransf_4 | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_3197_2 HRGMv2_3197_2_68 68880 70214 - 2.A.66.1.28
Gene ID: HRGMv2_3197_2_65
Type: CAZyme
Location: 64247 - 65749 (-)
Gene ID: HRGMv2_3197_2_66
Type: pfam
Location: 65907 - 67856 (-)
Gene ID: HRGMv2_3197_2_67
Type: pfam
Location: 68125 - 68784 (+)
Gene ID: HRGMv2_3197_2_68
Type: TC
Location: 68880 - 70214 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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