Cluster: HRGMv2_3196_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3196
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3196_7 | HRGMv2_3196_7_17 | 18714 | 21380 | + | 3.A.1.122.13 |
| peptidase | HRGMv2_3196_7 | HRGMv2_3196_7_18 | 21472 | 22803 | - | M103.UPW |
| peptidase | HRGMv2_3196_7 | HRGMv2_3196_7_19 | 22800 | 24194 | - | M103.001 |
| CAZyme | HRGMv2_3196_7 | HRGMv2_3196_7_20 | 24392 | 25429 | + | GH5_37 |
| TC | HRGMv2_3196_7 | HRGMv2_3196_7_21 | 25492 | 26154 | - | 3.A.2.2.2 |
| TC | HRGMv2_3196_7 | HRGMv2_3196_7_22 | 26188 | 27558 | - | 3.A.2.2.2 |
| TC | HRGMv2_3196_7 | HRGMv2_3196_7_23 | 27558 | 29339 | - | 3.A.2.3.2 |
Gene ID: HRGMv2_3196_7_17
Type: TC
Location: 18714 - 21380 (+)
Type: TC
Location: 18714 - 21380 (+)
Gene ID: HRGMv2_3196_7_18
Type: peptidase
Location: 21472 - 22803 (-)
Type: peptidase
Location: 21472 - 22803 (-)
Gene ID: HRGMv2_3196_7_19
Type: peptidase
Location: 22800 - 24194 (-)
Type: peptidase
Location: 22800 - 24194 (-)
Gene ID: HRGMv2_3196_7_20
Type: CAZyme
Location: 24392 - 25429 (+)
Type: CAZyme
Location: 24392 - 25429 (+)
Gene ID: HRGMv2_3196_7_21
Type: TC
Location: 25492 - 26154 (-)
Type: TC
Location: 25492 - 26154 (-)
Gene ID: HRGMv2_3196_7_22
Type: TC
Location: 26188 - 27558 (-)
Type: TC
Location: 26188 - 27558 (-)
Gene ID: HRGMv2_3196_7_23
Type: TC
Location: 27558 - 29339 (-)
Type: TC
Location: 27558 - 29339 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.