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Cluster: HRGMv2_3196_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3196_5 HRGMv2_3196_5_51 52050 53792 + 3.A.1.135.5
CAZyme HRGMv2_3196_5 HRGMv2_3196_5_52 53884 55947 + GH42
pfam HRGMv2_3196_5 HRGMv2_3196_5_53 56105 57106 + 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
TC HRGMv2_3196_5 HRGMv2_3196_5_54 57402 58007 + 3.A.1.30.1
TC HRGMv2_3196_5 HRGMv2_3196_5_55 58050 58931 + 3.A.1.17.8
TC HRGMv2_3196_5 HRGMv2_3196_5_56 58936 60357 + 3.A.1.30.1
pfam HRGMv2_3196_5 HRGMv2_3196_5_57 60344 61045 + CbiQ
CAZyme HRGMv2_3196_5 HRGMv2_3196_5_58 61101 62864 - GH3
pfam HRGMv2_3196_5 HRGMv2_3196_5_59 62825 63310 - Glyco_hydro_3
CAZyme HRGMv2_3196_5 HRGMv2_3196_5_60 63547 65811 + GH3
CAZyme HRGMv2_3196_5 HRGMv2_3196_5_61 65839 67236 + GH30_1
Gene ID: HRGMv2_3196_5_51
Type: TC
Location: 52050 - 53792 (+)
Gene ID: HRGMv2_3196_5_52
Type: CAZyme
Location: 53884 - 55947 (+)
Gene ID: HRGMv2_3196_5_53
Type: pfam
Location: 56105 - 57106 (+)
Gene ID: HRGMv2_3196_5_54
Type: TC
Location: 57402 - 58007 (+)
Gene ID: HRGMv2_3196_5_55
Type: TC
Location: 58050 - 58931 (+)
Gene ID: HRGMv2_3196_5_56
Type: TC
Location: 58936 - 60357 (+)
Gene ID: HRGMv2_3196_5_57
Type: pfam
Location: 60344 - 61045 (+)
Gene ID: HRGMv2_3196_5_58
Type: CAZyme
Location: 61101 - 62864 (-)
Gene ID: HRGMv2_3196_5_59
Type: pfam
Location: 62825 - 63310 (-)
Gene ID: HRGMv2_3196_5_60
Type: CAZyme
Location: 63547 - 65811 (+)
Gene ID: HRGMv2_3196_5_61
Type: CAZyme
Location: 65839 - 67236 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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