dbCAN Logo

Cluster: HRGMv2_3196_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3196_1 HRGMv2_3196_1_114 124962 128123 + GH38
pfam HRGMv2_3196_1 HRGMv2_3196_1_115 128193 129317 - Aldo_ket_red | Fer4_7 | Fer4_8 | Fer4_9 | Fer4_17
pfam HRGMv2_3196_1 HRGMv2_3196_1_116 129563 130948 - Transpeptidase
TC HRGMv2_3196_1 HRGMv2_3196_1_117 130945 132639 - 2.A.103.1.3
pfam HRGMv2_3196_1 HRGMv2_3196_1_118 132821 136306 - DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
pfam HRGMv2_3196_1 HRGMv2_3196_1_119 136346 136951 - Pept_tRNA_hydro
CAZyme HRGMv2_3196_1 HRGMv2_3196_1_120 137086 137973 - GH43_17
Gene ID: HRGMv2_3196_1_114
Type: CAZyme
Location: 124962 - 128123 (+)
Gene ID: HRGMv2_3196_1_115
Type: pfam
Location: 128193 - 129317 (-)
Gene ID: HRGMv2_3196_1_116
Type: pfam
Location: 129563 - 130948 (-)
Gene ID: HRGMv2_3196_1_117
Type: TC
Location: 130945 - 132639 (-)
Gene ID: HRGMv2_3196_1_118
Type: pfam
Location: 132821 - 136306 (-)
Gene ID: HRGMv2_3196_1_119
Type: pfam
Location: 136346 - 136951 (-)
Gene ID: HRGMv2_3196_1_120
Type: CAZyme
Location: 137086 - 137973 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List