Cluster: HRGMv2_3196_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3196
- CGC Family ID: CGCFAM_00628
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3196_43 | HRGMv2_3196_43_9 | 5887 | 7194 | - | GH13_20 |
| TF | HRGMv2_3196_43 | HRGMv2_3196_43_10 | 7769 | 8128 | + | HTH_5 |
| STP | HRGMv2_3196_43 | HRGMv2_3196_43_11 | 8162 | 8386 | + | HMA |
| TC | HRGMv2_3196_43 | HRGMv2_3196_43_12 | 8405 | 10288 | + | 3.A.3.6.10 |
| NULL(UNKNOWN) | HRGMv2_3196_43 | HRGMv2_3196_43_13 | 10357 | 10905 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3196_43 | HRGMv2_3196_43_14 | 11109 | 12119 | - | 8.A.21.2.2 |
Gene ID: HRGMv2_3196_43_9
Type: CAZyme
Location: 5887 - 7194 (-)
Type: CAZyme
Location: 5887 - 7194 (-)
Gene ID: HRGMv2_3196_43_10
Type: TF
Location: 7769 - 8128 (+)
Type: TF
Location: 7769 - 8128 (+)
Gene ID: HRGMv2_3196_43_11
Type: STP
Location: 8162 - 8386 (+)
Type: STP
Location: 8162 - 8386 (+)
Gene ID: HRGMv2_3196_43_12
Type: TC
Location: 8405 - 10288 (+)
Type: TC
Location: 8405 - 10288 (+)
Gene ID: HRGMv2_3196_43_13
Type:
Location: 10357 - 10905 (-)
Type:
Location: 10357 - 10905 (-)
Gene ID: HRGMv2_3196_43_14
Type: TC
Location: 11109 - 12119 (-)
Type: TC
Location: 11109 - 12119 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.