dbCAN Logo

Cluster: HRGMv2_3196_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3196_42 HRGMv2_3196_42_4 4638 7736 - GT39
NULL(UNKNOWN) HRGMv2_3196_42 HRGMv2_3196_42_5 7799 7945 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3196_42 HRGMv2_3196_42_6 7969 10965 + GH2
TC HRGMv2_3196_42 HRGMv2_3196_42_7 11300 12670 - 2.A.66.1.32
TC HRGMv2_3196_42 HRGMv2_3196_42_8 12909 15659 + 3.A.5.1.3
pfam HRGMv2_3196_42 HRGMv2_3196_42_9 15716 16525 - Hydrolase | Hydrolase_like | Hydrolase_6
CAZyme HRGMv2_3196_42 HRGMv2_3196_42_10 16678 18330 + GH13_31
CAZyme HRGMv2_3196_42 HRGMv2_3196_42_11 18391 19080 - CE4
Gene ID: HRGMv2_3196_42_4
Type: CAZyme
Location: 4638 - 7736 (-)
Gene ID: HRGMv2_3196_42_5
Type:
Location: 7799 - 7945 (-)
Gene ID: HRGMv2_3196_42_6
Type: CAZyme
Location: 7969 - 10965 (+)
Gene ID: HRGMv2_3196_42_7
Type: TC
Location: 11300 - 12670 (-)
Gene ID: HRGMv2_3196_42_8
Type: TC
Location: 12909 - 15659 (+)
Gene ID: HRGMv2_3196_42_9
Type: pfam
Location: 15716 - 16525 (-)
Gene ID: HRGMv2_3196_42_10
Type: CAZyme
Location: 16678 - 18330 (+)
Gene ID: HRGMv2_3196_42_11
Type: CAZyme
Location: 18391 - 19080 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List