Cluster: HRGMv2_3196_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3196
- CGC Family ID: CGCFAM_01501
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3196_34 | HRGMv2_3196_34_4 | 4617 | 6134 | - | GH51_1 |
| CAZyme | HRGMv2_3196_34 | HRGMv2_3196_34_5 | 6306 | 8651 | - | GH31_3 |
| TF | HRGMv2_3196_34 | HRGMv2_3196_34_6 | 8690 | 10300 | - | HTH_AraC |
| TC | HRGMv2_3196_34 | HRGMv2_3196_34_7 | 10304 | 12157 | - | 9.B.33.1.1 |
| TC | HRGMv2_3196_34 | HRGMv2_3196_34_8 | 12319 | 13167 | - | 3.A.1.1.28 |
| TC | HRGMv2_3196_34 | HRGMv2_3196_34_9 | 13167 | 13907 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_3196_34_4
Type: CAZyme
Location: 4617 - 6134 (-)
Type: CAZyme
Location: 4617 - 6134 (-)
Gene ID: HRGMv2_3196_34_5
Type: CAZyme
Location: 6306 - 8651 (-)
Type: CAZyme
Location: 6306 - 8651 (-)
Gene ID: HRGMv2_3196_34_6
Type: TF
Location: 8690 - 10300 (-)
Type: TF
Location: 8690 - 10300 (-)
Gene ID: HRGMv2_3196_34_7
Type: TC
Location: 10304 - 12157 (-)
Type: TC
Location: 10304 - 12157 (-)
Gene ID: HRGMv2_3196_34_8
Type: TC
Location: 12319 - 13167 (-)
Type: TC
Location: 12319 - 13167 (-)
Gene ID: HRGMv2_3196_34_9
Type: TC
Location: 13167 - 13907 (-)
Type: TC
Location: 13167 - 13907 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.