Cluster: HRGMv2_3196_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3196
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3196_19 | HRGMv2_3196_19_9 | 12140 | 12982 | - | 3.A.1.1.28 |
| TC | HRGMv2_3196_19 | HRGMv2_3196_19_10 | 12982 | 13869 | - | 3.A.1.1.28 |
| STP | HRGMv2_3196_19 | HRGMv2_3196_19_11 | 14145 | 15458 | - | SBP_bac_1 |
| STP | HRGMv2_3196_19 | HRGMv2_3196_19_12 | 16009 | 17028 | - | HATPase_c |
| CAZyme | HRGMv2_3196_19 | HRGMv2_3196_19_13 | 17136 | 18428 | - | GH13 |
Gene ID: HRGMv2_3196_19_9
Type: TC
Location: 12140 - 12982 (-)
Type: TC
Location: 12140 - 12982 (-)
Gene ID: HRGMv2_3196_19_10
Type: TC
Location: 12982 - 13869 (-)
Type: TC
Location: 12982 - 13869 (-)
Gene ID: HRGMv2_3196_19_11
Type: STP
Location: 14145 - 15458 (-)
Type: STP
Location: 14145 - 15458 (-)
Gene ID: HRGMv2_3196_19_12
Type: STP
Location: 16009 - 17028 (-)
Type: STP
Location: 16009 - 17028 (-)
Gene ID: HRGMv2_3196_19_13
Type: CAZyme
Location: 17136 - 18428 (-)
Type: CAZyme
Location: 17136 - 18428 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.