Cluster: HRGMv2_3196_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3196
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3196_19 | HRGMv2_3196_19_1 | 54 | 1541 | - | GH29 |
| pfam | HRGMv2_3196_19 | HRGMv2_3196_19_2 | 1689 | 2861 | + | malic | AlaDh_PNT_C | Malic_M |
| TC | HRGMv2_3196_19 | HRGMv2_3196_19_3 | 2957 | 4657 | - | 2.A.114.1.3 |
| NULL(UNKNOWN) | HRGMv2_3196_19 | HRGMv2_3196_19_4 | 4741 | 5355 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3196_19 | HRGMv2_3196_19_5 | 5886 | 6971 | - | GH179 |
Gene ID: HRGMv2_3196_19_1
Type: CAZyme
Location: 54 - 1541 (-)
Type: CAZyme
Location: 54 - 1541 (-)
Gene ID: HRGMv2_3196_19_2
Type: pfam
Location: 1689 - 2861 (+)
Type: pfam
Location: 1689 - 2861 (+)
Gene ID: HRGMv2_3196_19_3
Type: TC
Location: 2957 - 4657 (-)
Type: TC
Location: 2957 - 4657 (-)
Gene ID: HRGMv2_3196_19_4
Type:
Location: 4741 - 5355 (-)
Type:
Location: 4741 - 5355 (-)
Gene ID: HRGMv2_3196_19_5
Type: CAZyme
Location: 5886 - 6971 (-)
Type: CAZyme
Location: 5886 - 6971 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.