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Cluster: HRGMv2_3196_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3196_10 HRGMv2_3196_10_3 900 1658 + 3.A.1.149.1
pfam HRGMv2_3196_10 HRGMv2_3196_10_4 1642 2280 + ABC2_membrane_5
NULL(UNKNOWN) HRGMv2_3196_10 HRGMv2_3196_10_5 2329 3900 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3196_10 HRGMv2_3196_10_6 3893 4600 - 3.A.1.147.2
CAZyme HRGMv2_3196_10 HRGMv2_3196_10_7 4735 5454 - GT51
NULL(UNKNOWN) HRGMv2_3196_10 HRGMv2_3196_10_8 5481 5723 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3196_10 HRGMv2_3196_10_9 5752 7779 - 3.A.1.134.4
TC HRGMv2_3196_10 HRGMv2_3196_10_10 7776 8540 - 3.A.1.134.4
STP HRGMv2_3196_10 HRGMv2_3196_10_11 8656 9648 - HATPase_c
TF HRGMv2_3196_10 HRGMv2_3196_10_12 9666 10337 - Trans_reg_C
TC HRGMv2_3196_10 HRGMv2_3196_10_13 10602 11783 + 2.A.36.2.1
Gene ID: HRGMv2_3196_10_3
Type: TC
Location: 900 - 1658 (+)
Gene ID: HRGMv2_3196_10_4
Type: pfam
Location: 1642 - 2280 (+)
Gene ID: HRGMv2_3196_10_5
Type:
Location: 2329 - 3900 (-)
Gene ID: HRGMv2_3196_10_6
Type: TC
Location: 3893 - 4600 (-)
Gene ID: HRGMv2_3196_10_7
Type: CAZyme
Location: 4735 - 5454 (-)
Gene ID: HRGMv2_3196_10_8
Type:
Location: 5481 - 5723 (-)
Gene ID: HRGMv2_3196_10_9
Type: TC
Location: 5752 - 7779 (-)
Gene ID: HRGMv2_3196_10_10
Type: TC
Location: 7776 - 8540 (-)
Gene ID: HRGMv2_3196_10_11
Type: STP
Location: 8656 - 9648 (-)
Gene ID: HRGMv2_3196_10_12
Type: TF
Location: 9666 - 10337 (-)
Gene ID: HRGMv2_3196_10_13
Type: TC
Location: 10602 - 11783 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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