Cluster: HRGMv2_3196_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3196
- CGC Family ID: CGCFAM_01910
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3196_9 | HRGMv2_3196_9_29 | 29481 | 30527 | - | 3.A.1.5.20 |
| TC | HRGMv2_3196_9 | HRGMv2_3196_9_30 | 30527 | 31675 | - | 3.A.1.5.12 |
| TC | HRGMv2_3196_9 | HRGMv2_3196_9_31 | 31691 | 33295 | - | 3.A.1.5.20 |
| TC | HRGMv2_3196_9 | HRGMv2_3196_9_32 | 33315 | 34301 | - | 3.A.1.5.20 |
| STP | HRGMv2_3196_9 | HRGMv2_3196_9_33 | 34534 | 36828 | - | SBP_bac_5 |
| NULL(UNKNOWN) | HRGMv2_3196_9 | HRGMv2_3196_9_34 | 37084 | 37614 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3196_9 | HRGMv2_3196_9_35 | 38193 | 39500 | + | GH29 |
Gene ID: HRGMv2_3196_9_29
Type: TC
Location: 29481 - 30527 (-)
Type: TC
Location: 29481 - 30527 (-)
Gene ID: HRGMv2_3196_9_30
Type: TC
Location: 30527 - 31675 (-)
Type: TC
Location: 30527 - 31675 (-)
Gene ID: HRGMv2_3196_9_31
Type: TC
Location: 31691 - 33295 (-)
Type: TC
Location: 31691 - 33295 (-)
Gene ID: HRGMv2_3196_9_32
Type: TC
Location: 33315 - 34301 (-)
Type: TC
Location: 33315 - 34301 (-)
Gene ID: HRGMv2_3196_9_33
Type: STP
Location: 34534 - 36828 (-)
Type: STP
Location: 34534 - 36828 (-)
Gene ID: HRGMv2_3196_9_34
Type:
Location: 37084 - 37614 (-)
Type:
Location: 37084 - 37614 (-)
Gene ID: HRGMv2_3196_9_35
Type: CAZyme
Location: 38193 - 39500 (+)
Type: CAZyme
Location: 38193 - 39500 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.