Cluster: HRGMv2_3196_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3196
- CGC Family ID: CGCFAM_00223
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3196_1 | HRGMv2_3196_1_17 | 19024 | 20277 | + | GH43_35 |
| TF | HRGMv2_3196_1 | HRGMv2_3196_1_18 | 20340 | 21920 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_3196_1 | HRGMv2_3196_1_19 | 21917 | 23719 | + | 8.A.59.2.1 |
| TC | HRGMv2_3196_1 | HRGMv2_3196_1_20 | 24021 | 24953 | + | 3.A.1.1.10 |
| TC | HRGMv2_3196_1 | HRGMv2_3196_1_21 | 24986 | 25915 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_3196_1_17
Type: CAZyme
Location: 19024 - 20277 (+)
Type: CAZyme
Location: 19024 - 20277 (+)
Gene ID: HRGMv2_3196_1_18
Type: TF
Location: 20340 - 21920 (+)
Type: TF
Location: 20340 - 21920 (+)
Gene ID: HRGMv2_3196_1_19
Type: TC
Location: 21917 - 23719 (+)
Type: TC
Location: 21917 - 23719 (+)
Gene ID: HRGMv2_3196_1_20
Type: TC
Location: 24021 - 24953 (+)
Type: TC
Location: 24021 - 24953 (+)
Gene ID: HRGMv2_3196_1_21
Type: TC
Location: 24986 - 25915 (+)
Type: TC
Location: 24986 - 25915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.