Cluster: HRGMv2_3195_CGC43
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3195
- CGC Family ID: CGCFAM_01138
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3195_51 | HRGMv2_3195_51_5 | 5400 | 7331 | + | GH13_14 |
| NULL(UNKNOWN) | HRGMv2_3195_51 | HRGMv2_3195_51_6 | 7761 | 8102 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3195_51 | HRGMv2_3195_51_7 | 8102 | 9199 | + | vATP-synt_AC39 |
| TC | HRGMv2_3195_51 | HRGMv2_3195_51_8 | 9201 | 11141 | + | 3.A.2.3.3 |
Gene ID: HRGMv2_3195_51_5
Type: CAZyme
Location: 5400 - 7331 (+)
Type: CAZyme
Location: 5400 - 7331 (+)
Gene ID: HRGMv2_3195_51_6
Type:
Location: 7761 - 8102 (+)
Type:
Location: 7761 - 8102 (+)
Gene ID: HRGMv2_3195_51_7
Type: pfam
Location: 8102 - 9199 (+)
Type: pfam
Location: 8102 - 9199 (+)
Gene ID: HRGMv2_3195_51_8
Type: TC
Location: 9201 - 11141 (+)
Type: TC
Location: 9201 - 11141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.