Cluster: HRGMv2_3195_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_50 | HRGMv2_3195_50_1 | 58 | 2643 | - | 2.A.21.9.2 |
| STP | HRGMv2_3195_50 | HRGMv2_3195_50_2 | 2980 | 3576 | + | cNMP_binding |
| CAZyme | HRGMv2_3195_50 | HRGMv2_3195_50_3 | 3705 | 4961 | + | GH3 |
| CAZyme | HRGMv2_3195_50 | HRGMv2_3195_50_4 | 4948 | 6114 | + | GT4 |
Gene ID: HRGMv2_3195_50_1
Type: TC
Location: 58 - 2643 (-)
Type: TC
Location: 58 - 2643 (-)
Gene ID: HRGMv2_3195_50_2
Type: STP
Location: 2980 - 3576 (+)
Type: STP
Location: 2980 - 3576 (+)
Gene ID: HRGMv2_3195_50_3
Type: CAZyme
Location: 3705 - 4961 (+)
Type: CAZyme
Location: 3705 - 4961 (+)
Gene ID: HRGMv2_3195_50_4
Type: CAZyme
Location: 4948 - 6114 (+)
Type: CAZyme
Location: 4948 - 6114 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.