Cluster: HRGMv2_3195_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_48 | HRGMv2_3195_48_5 | 2245 | 3150 | + | 2.A.115.1.1 |
| TF | HRGMv2_3195_48 | HRGMv2_3195_48_6 | 3211 | 3957 | - | HTH_3 |
| peptidase | HRGMv2_3195_48 | HRGMv2_3195_48_7 | 4100 | 5497 | - | M18.UPW |
| CAZyme | HRGMv2_3195_48 | HRGMv2_3195_48_8 | 5565 | 6173 | - | GH23 |
Gene ID: HRGMv2_3195_48_5
Type: TC
Location: 2245 - 3150 (+)
Type: TC
Location: 2245 - 3150 (+)
Gene ID: HRGMv2_3195_48_6
Type: TF
Location: 3211 - 3957 (-)
Type: TF
Location: 3211 - 3957 (-)
Gene ID: HRGMv2_3195_48_7
Type: peptidase
Location: 4100 - 5497 (-)
Type: peptidase
Location: 4100 - 5497 (-)
Gene ID: HRGMv2_3195_48_8
Type: CAZyme
Location: 5565 - 6173 (-)
Type: CAZyme
Location: 5565 - 6173 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.