Cluster: HRGMv2_3195_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_25 | HRGMv2_3195_25_6 | 5442 | 6353 | + | 3.A.1.6.2 |
| NULL(UNKNOWN) | HRGMv2_3195_25 | HRGMv2_3195_25_7 | 6356 | 7006 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3195_25 | HRGMv2_3195_25_8 | 7003 | 7698 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3195_25 | HRGMv2_3195_25_9 | 7794 | 9698 | + | GH42 |
Gene ID: HRGMv2_3195_25_6
Type: TC
Location: 5442 - 6353 (+)
Type: TC
Location: 5442 - 6353 (+)
Gene ID: HRGMv2_3195_25_7
Type:
Location: 6356 - 7006 (+)
Type:
Location: 6356 - 7006 (+)
Gene ID: HRGMv2_3195_25_8
Type:
Location: 7003 - 7698 (+)
Type:
Location: 7003 - 7698 (+)
Gene ID: HRGMv2_3195_25_9
Type: CAZyme
Location: 7794 - 9698 (+)
Type: CAZyme
Location: 7794 - 9698 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.