Cluster: HRGMv2_3195_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3195_19 | HRGMv2_3195_19_13 | 13497 | 15878 | + | GT35 |
| CAZyme | HRGMv2_3195_19 | HRGMv2_3195_19_14 | 15976 | 17826 | + | GH13_39 |
| pfam | HRGMv2_3195_19 | HRGMv2_3195_19_15 | 18027 | 18467 | + | NfeD |
| TC | HRGMv2_3195_19 | HRGMv2_3195_19_16 | 18547 | 19467 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_3195_19_13
Type: CAZyme
Location: 13497 - 15878 (+)
Type: CAZyme
Location: 13497 - 15878 (+)
Gene ID: HRGMv2_3195_19_14
Type: CAZyme
Location: 15976 - 17826 (+)
Type: CAZyme
Location: 15976 - 17826 (+)
Gene ID: HRGMv2_3195_19_15
Type: pfam
Location: 18027 - 18467 (+)
Type: pfam
Location: 18027 - 18467 (+)
Gene ID: HRGMv2_3195_19_16
Type: TC
Location: 18547 - 19467 (+)
Type: TC
Location: 18547 - 19467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.