Cluster: HRGMv2_3195_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3195
- CGC Family ID: CGCFAM_01857
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_17 | HRGMv2_3195_17_1 | 2 | 1063 | - | 3.A.1.135.5 |
| TC | HRGMv2_3195_17 | HRGMv2_3195_17_2 | 1047 | 2792 | - | 3.A.1.135.5 |
| TF | HRGMv2_3195_17 | HRGMv2_3195_17_3 | 2808 | 3230 | - | MarR |
| CAZyme | HRGMv2_3195_17 | HRGMv2_3195_17_4 | 3417 | 7787 | - | CBM32 | CBM51 |
Gene ID: HRGMv2_3195_17_1
Type: TC
Location: 2 - 1063 (-)
Type: TC
Location: 2 - 1063 (-)
Gene ID: HRGMv2_3195_17_2
Type: TC
Location: 1047 - 2792 (-)
Type: TC
Location: 1047 - 2792 (-)
Gene ID: HRGMv2_3195_17_3
Type: TF
Location: 2808 - 3230 (-)
Type: TF
Location: 2808 - 3230 (-)
Gene ID: HRGMv2_3195_17_4
Type: CAZyme
Location: 3417 - 7787 (-)
Type: CAZyme
Location: 3417 - 7787 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.