Cluster: HRGMv2_3195_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_1 | HRGMv2_3195_1_44 | 46195 | 46713 | - | 3.A.1.26.5 |
| pfam | HRGMv2_3195_1 | HRGMv2_3195_1_45 | 47167 | 50580 | - | SpaA | DUF7601 |
| CAZyme | HRGMv2_3195_1 | HRGMv2_3195_1_46 | 50726 | 53242 | - | GH31_2 |
| CAZyme | HRGMv2_3195_1 | HRGMv2_3195_1_47 | 53261 | 55753 | - | GH31_2 |
| TC | HRGMv2_3195_1 | HRGMv2_3195_1_48 | 55883 | 57199 | - | 2.A.56.1.5 |
| TC | HRGMv2_3195_1 | HRGMv2_3195_1_49 | 57199 | 57678 | - | 2.A.56.1.5 |
| TC | HRGMv2_3195_1 | HRGMv2_3195_1_50 | 57745 | 58770 | - | 2.A.56.1.5 |
Gene ID: HRGMv2_3195_1_44
Type: TC
Location: 46195 - 46713 (-)
Type: TC
Location: 46195 - 46713 (-)
Gene ID: HRGMv2_3195_1_45
Type: pfam
Location: 47167 - 50580 (-)
Type: pfam
Location: 47167 - 50580 (-)
Gene ID: HRGMv2_3195_1_46
Type: CAZyme
Location: 50726 - 53242 (-)
Type: CAZyme
Location: 50726 - 53242 (-)
Gene ID: HRGMv2_3195_1_47
Type: CAZyme
Location: 53261 - 55753 (-)
Type: CAZyme
Location: 53261 - 55753 (-)
Gene ID: HRGMv2_3195_1_48
Type: TC
Location: 55883 - 57199 (-)
Type: TC
Location: 55883 - 57199 (-)
Gene ID: HRGMv2_3195_1_49
Type: TC
Location: 57199 - 57678 (-)
Type: TC
Location: 57199 - 57678 (-)
Gene ID: HRGMv2_3195_1_50
Type: TC
Location: 57745 - 58770 (-)
Type: TC
Location: 57745 - 58770 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.