Cluster: HRGMv2_3195_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_11 | HRGMv2_3195_11_58 | 58180 | 58755 | + | 4.F.1.1.7 |
| pfam | HRGMv2_3195_11 | HRGMv2_3195_11_59 | 58845 | 60239 | + | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| CAZyme | HRGMv2_3195_11 | HRGMv2_3195_11_60 | 60257 | 63367 | + | GT39 |
Gene ID: HRGMv2_3195_11_58
Type: TC
Location: 58180 - 58755 (+)
Type: TC
Location: 58180 - 58755 (+)
Gene ID: HRGMv2_3195_11_59
Type: pfam
Location: 58845 - 60239 (+)
Type: pfam
Location: 58845 - 60239 (+)
Gene ID: HRGMv2_3195_11_60
Type: CAZyme
Location: 60257 - 63367 (+)
Type: CAZyme
Location: 60257 - 63367 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.