Cluster: HRGMv2_3195_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3195
- CGC Family ID: CGCFAM_00282
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_8 | HRGMv2_3195_8_46 | 39600 | 40646 | + | 4.D.1.3.3 |
| pfam | HRGMv2_3195_8 | HRGMv2_3195_8_47 | 40664 | 41785 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_3195_8 | HRGMv2_3195_8_48 | 41805 | 44444 | + | GT2 |
Gene ID: HRGMv2_3195_8_46
Type: TC
Location: 39600 - 40646 (+)
Type: TC
Location: 39600 - 40646 (+)
Gene ID: HRGMv2_3195_8_47
Type: pfam
Location: 40664 - 41785 (+)
Type: pfam
Location: 40664 - 41785 (+)
Gene ID: HRGMv2_3195_8_48
Type: CAZyme
Location: 41805 - 44444 (+)
Type: CAZyme
Location: 41805 - 44444 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.