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Cluster: HRGMv2_3195_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3195_7 HRGMv2_3195_7_8 8263 9393 - CE9
sulfatase HRGMv2_3195_7 HRGMv2_3195_7_9 9463 10188 - S1_9
NULL(UNKNOWN) HRGMv2_3195_7 HRGMv2_3195_7_10 10233 10478 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3195_7 HRGMv2_3195_7_11 10487 11980 - 4.A.1.1.7
pfam HRGMv2_3195_7 HRGMv2_3195_7_12 12331 13056 - DNA_alkylation
pfam HRGMv2_3195_7 HRGMv2_3195_7_13 13188 13748 - Thia_YuaJ
CAZyme HRGMv2_3195_7 HRGMv2_3195_7_14 13974 15683 - CBM48 | GH13_9
CAZyme HRGMv2_3195_7 HRGMv2_3195_7_15 15981 18005 + GH25
Gene ID: HRGMv2_3195_7_8
Type: CAZyme
Location: 8263 - 9393 (-)
Gene ID: HRGMv2_3195_7_9
Type: sulfatase
Location: 9463 - 10188 (-)
Gene ID: HRGMv2_3195_7_10
Type:
Location: 10233 - 10478 (+)
Gene ID: HRGMv2_3195_7_11
Type: TC
Location: 10487 - 11980 (-)
Gene ID: HRGMv2_3195_7_12
Type: pfam
Location: 12331 - 13056 (-)
Gene ID: HRGMv2_3195_7_13
Type: pfam
Location: 13188 - 13748 (-)
Gene ID: HRGMv2_3195_7_14
Type: CAZyme
Location: 13974 - 15683 (-)
Gene ID: HRGMv2_3195_7_15
Type: CAZyme
Location: 15981 - 18005 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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