Cluster: HRGMv2_3193_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3193
- CGC Family ID: CGCFAM_03579
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3193_263 | HRGMv2_3193_263_5 | 1629 | 2072 | + | 9.A.11.1.1 |
| TC | HRGMv2_3193_263 | HRGMv2_3193_263_6 | 2119 | 3153 | + | 9.A.11.1.1 |
| TC | HRGMv2_3193_263 | HRGMv2_3193_263_7 | 3156 | 3512 | + | 9.A.11.1.1 |
| NULL(UNKNOWN) | HRGMv2_3193_263 | HRGMv2_3193_263_8 | 3580 | 4233 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3193_263 | HRGMv2_3193_263_9 | 4298 | 6715 | - | GH106 |
| pfam | HRGMv2_3193_263 | HRGMv2_3193_263_10 | 6829 | 8934 | - | FUSC_2 |
| CAZyme | HRGMv2_3193_263 | HRGMv2_3193_263_11 | 9274 | 11373 | + | GH36 |
Gene ID: HRGMv2_3193_263_5
Type: TC
Location: 1629 - 2072 (+)
Type: TC
Location: 1629 - 2072 (+)
Gene ID: HRGMv2_3193_263_6
Type: TC
Location: 2119 - 3153 (+)
Type: TC
Location: 2119 - 3153 (+)
Gene ID: HRGMv2_3193_263_7
Type: TC
Location: 3156 - 3512 (+)
Type: TC
Location: 3156 - 3512 (+)
Gene ID: HRGMv2_3193_263_8
Type:
Location: 3580 - 4233 (-)
Type:
Location: 3580 - 4233 (-)
Gene ID: HRGMv2_3193_263_9
Type: CAZyme
Location: 4298 - 6715 (-)
Type: CAZyme
Location: 4298 - 6715 (-)
Gene ID: HRGMv2_3193_263_10
Type: pfam
Location: 6829 - 8934 (-)
Type: pfam
Location: 6829 - 8934 (-)
Gene ID: HRGMv2_3193_263_11
Type: CAZyme
Location: 9274 - 11373 (+)
Type: CAZyme
Location: 9274 - 11373 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Egerieicola
Species
Egerieicola sp019416775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.