Cluster: HRGMv2_3193_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3193
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3193_126 | HRGMv2_3193_126_2 | 1421 | 2338 | + | 3.A.1.1.11 |
| TC | HRGMv2_3193_126 | HRGMv2_3193_126_3 | 2353 | 3228 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_3193_126 | HRGMv2_3193_126_4 | 3338 | 4912 | + | GH43_4 |
| CAZyme | HRGMv2_3193_126 | HRGMv2_3193_126_5 | 5055 | 5822 | + | GH43_4 |
Gene ID: HRGMv2_3193_126_2
Type: TC
Location: 1421 - 2338 (+)
Type: TC
Location: 1421 - 2338 (+)
Gene ID: HRGMv2_3193_126_3
Type: TC
Location: 2353 - 3228 (+)
Type: TC
Location: 2353 - 3228 (+)
Gene ID: HRGMv2_3193_126_4
Type: CAZyme
Location: 3338 - 4912 (+)
Type: CAZyme
Location: 3338 - 4912 (+)
Gene ID: HRGMv2_3193_126_5
Type: CAZyme
Location: 5055 - 5822 (+)
Type: CAZyme
Location: 5055 - 5822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Egerieicola
Species
Egerieicola sp019416775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.