Cluster: HRGMv2_3193_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3193
- CGC Family ID: CGCFAM_01024
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3193_319 | HRGMv2_3193_319_1 | 1 | 1896 | - | GT2 |
| TC | HRGMv2_3193_319 | HRGMv2_3193_319_2 | 1937 | 2680 | - | 3.A.1.103.1 |
| TC | HRGMv2_3193_319 | HRGMv2_3193_319_3 | 2699 | 3472 | - | 3.A.1.103.1 |
| STP | HRGMv2_3193_319 | HRGMv2_3193_319_4 | 3556 | 4287 | - | Pribosyltran |
| pfam | HRGMv2_3193_319 | HRGMv2_3193_319_5 | 4277 | 7468 | - | FtsX | FtsX | MacB_PCD | MacB_PCD |
| TC | HRGMv2_3193_319 | HRGMv2_3193_319_6 | 7547 | 8248 | - | 3.A.1.125.2 |
Gene ID: HRGMv2_3193_319_1
Type: CAZyme
Location: 1 - 1896 (-)
Type: CAZyme
Location: 1 - 1896 (-)
Gene ID: HRGMv2_3193_319_2
Type: TC
Location: 1937 - 2680 (-)
Type: TC
Location: 1937 - 2680 (-)
Gene ID: HRGMv2_3193_319_3
Type: TC
Location: 2699 - 3472 (-)
Type: TC
Location: 2699 - 3472 (-)
Gene ID: HRGMv2_3193_319_4
Type: STP
Location: 3556 - 4287 (-)
Type: STP
Location: 3556 - 4287 (-)
Gene ID: HRGMv2_3193_319_5
Type: pfam
Location: 4277 - 7468 (-)
Type: pfam
Location: 4277 - 7468 (-)
Gene ID: HRGMv2_3193_319_6
Type: TC
Location: 7547 - 8248 (-)
Type: TC
Location: 7547 - 8248 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Egerieicola
Species
Egerieicola sp019416775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.