Cluster: HRGMv2_3192_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3192
- CGC Family ID: CGCFAM_00987
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3192_10 | HRGMv2_3192_10_31 | 28248 | 29051 | - | CE4 |
| TC | HRGMv2_3192_10 | HRGMv2_3192_10_32 | 29261 | 30586 | + | 3.D.6.1.2 |
| TC | HRGMv2_3192_10 | HRGMv2_3192_10_33 | 30583 | 32244 | + | 3.D.6.1.2 |
Gene ID: HRGMv2_3192_10_31
Type: CAZyme
Location: 28248 - 29051 (-)
Type: CAZyme
Location: 28248 - 29051 (-)
Gene ID: HRGMv2_3192_10_32
Type: TC
Location: 29261 - 30586 (+)
Type: TC
Location: 29261 - 30586 (+)
Gene ID: HRGMv2_3192_10_33
Type: TC
Location: 30583 - 32244 (+)
Type: TC
Location: 30583 - 32244 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp905215425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3192_10_32 | vegetarian > vegan | 2.02935 | 0.00560 |
| HRGMv2_3192_10_33 | vegetarian > omnivore | 1.55607 | 0.00937 |
| HRGMv2_3192_10_33 | vegetarian > vegan | 1.41533 | 0.00560 |