Cluster: HRGMv2_3192_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3192
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3192_2 | HRGMv2_3192_2_1 | 226 | 1254 | - | GT2 |
| STP | HRGMv2_3192_2 | HRGMv2_3192_2_2 | 1486 | 2649 | - | Pyr_redox |
| pfam | HRGMv2_3192_2 | HRGMv2_3192_2_3 | 3071 | 4519 | + | NAPRTase_N | NAPRTase_C |
| TC | HRGMv2_3192_2 | HRGMv2_3192_2_4 | 4565 | 6577 | - | 3.A.3.6.10 |
Gene ID: HRGMv2_3192_2_1
Type: CAZyme
Location: 226 - 1254 (-)
Type: CAZyme
Location: 226 - 1254 (-)
Gene ID: HRGMv2_3192_2_2
Type: STP
Location: 1486 - 2649 (-)
Type: STP
Location: 1486 - 2649 (-)
Gene ID: HRGMv2_3192_2_3
Type: pfam
Location: 3071 - 4519 (+)
Type: pfam
Location: 3071 - 4519 (+)
Gene ID: HRGMv2_3192_2_4
Type: TC
Location: 4565 - 6577 (-)
Type: TC
Location: 4565 - 6577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp905215425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3192_2_4 | vegetarian > vegan | 1.41348 | 0.00560 |