Cluster: HRGMv2_3192_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3192
- CGC Family ID: CGCFAM_00127
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3192_26 | HRGMv2_3192_26_9 | 7658 | 10147 | - | 9.A.8.1.6 |
| STP | HRGMv2_3192_26 | HRGMv2_3192_26_10 | 10201 | 10422 | - | FeoA |
| STP | HRGMv2_3192_26 | HRGMv2_3192_26_11 | 10458 | 10670 | - | FeoA |
| CAZyme | HRGMv2_3192_26 | HRGMv2_3192_26_12 | 10976 | 11710 | + | GT26 |
Gene ID: HRGMv2_3192_26_9
Type: TC
Location: 7658 - 10147 (-)
Type: TC
Location: 7658 - 10147 (-)
Gene ID: HRGMv2_3192_26_10
Type: STP
Location: 10201 - 10422 (-)
Type: STP
Location: 10201 - 10422 (-)
Gene ID: HRGMv2_3192_26_11
Type: STP
Location: 10458 - 10670 (-)
Type: STP
Location: 10458 - 10670 (-)
Gene ID: HRGMv2_3192_26_12
Type: CAZyme
Location: 10976 - 11710 (+)
Type: CAZyme
Location: 10976 - 11710 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp905215425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3192_26_11 | vegetarian > vegan | 2.22482 | 0.00560 |
| HRGMv2_3192_26_12 | vegetarian > vegan | 1.68333 | 0.00560 |