Cluster: HRGMv2_3192_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3192
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3192_13 | HRGMv2_3192_13_30 | 30728 | 31468 | - | CE4 |
| pfam | HRGMv2_3192_13 | HRGMv2_3192_13_31 | 31600 | 33066 | - | FGGY_N | FGGY_C |
| peptidase | HRGMv2_3192_13 | HRGMv2_3192_13_32 | 33070 | 34167 | - | M42.UNW |
| TC | HRGMv2_3192_13 | HRGMv2_3192_13_33 | 34171 | 35151 | - | 3.A.1.2.18 |
| TC | HRGMv2_3192_13 | HRGMv2_3192_13_34 | 35154 | 36149 | - | 3.A.1.2.11 |
| TC | HRGMv2_3192_13 | HRGMv2_3192_13_35 | 36146 | 37696 | - | 3.A.1.2.20 |
Gene ID: HRGMv2_3192_13_30
Type: CAZyme
Location: 30728 - 31468 (-)
Type: CAZyme
Location: 30728 - 31468 (-)
Gene ID: HRGMv2_3192_13_31
Type: pfam
Location: 31600 - 33066 (-)
Type: pfam
Location: 31600 - 33066 (-)
Gene ID: HRGMv2_3192_13_32
Type: peptidase
Location: 33070 - 34167 (-)
Type: peptidase
Location: 33070 - 34167 (-)
Gene ID: HRGMv2_3192_13_33
Type: TC
Location: 34171 - 35151 (-)
Type: TC
Location: 34171 - 35151 (-)
Gene ID: HRGMv2_3192_13_34
Type: TC
Location: 35154 - 36149 (-)
Type: TC
Location: 35154 - 36149 (-)
Gene ID: HRGMv2_3192_13_35
Type: TC
Location: 36146 - 37696 (-)
Type: TC
Location: 36146 - 37696 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp905215425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3192_13_30 | vegetarian > omnivore | 1.61846 | 0.00937 |
| HRGMv2_3192_13_30 | vegetarian > vegan | 1.56920 | 0.00560 |
| HRGMv2_3192_13_31 | vegetarian > omnivore | 2.76591 | 0.00937 |
| HRGMv2_3192_13_31 | vegetarian > vegan | 2.72964 | 0.00560 |
| HRGMv2_3192_13_32 | vegan > omnivore | 1.98283 | 0.01882 |
| HRGMv2_3192_13_32 | vegetarian > omnivore | 3.99059 | 0.00937 |
| HRGMv2_3192_13_32 | vegetarian > vegan | 2.00776 | 0.00560 |
| HRGMv2_3192_13_33 | vegetarian > omnivore | 3.68142 | 0.00937 |
| HRGMv2_3192_13_33 | vegetarian > vegan | 2.38660 | 0.00560 |
| HRGMv2_3192_13_34 | vegetarian > omnivore | 3.39046 | 0.00937 |
| HRGMv2_3192_13_34 | vegetarian > vegan | 1.81376 | 0.00560 |
| HRGMv2_3192_13_35 | vegetarian > omnivore | 2.34258 | 0.00937 |
| HRGMv2_3192_13_35 | vegetarian > vegan | 2.13875 | 0.00560 |