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Cluster: HRGMv2_3190_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3190_18 HRGMv2_3190_18_1 1 1599 + 3.A.12.1.1
pfam HRGMv2_3190_18 HRGMv2_3190_18_2 1626 3494 + Radical_SAM_N | DUF3362
TC HRGMv2_3190_18 HRGMv2_3190_18_3 3461 4396 + 3.A.11.1.4
pfam HRGMv2_3190_18 HRGMv2_3190_18_4 4396 4623 + DUF3006
CAZyme HRGMv2_3190_18 HRGMv2_3190_18_5 4661 6874 + GH26
CAZyme HRGMv2_3190_18 HRGMv2_3190_18_6 7470 10706 + GH87
CAZyme HRGMv2_3190_18 HRGMv2_3190_18_7 11245 14532 + GH28
TC HRGMv2_3190_18 HRGMv2_3190_18_8 14869 15726 + 3.A.1.3.27
TC HRGMv2_3190_18 HRGMv2_3190_18_9 15822 16523 + 3.A.1.3.20
TC HRGMv2_3190_18 HRGMv2_3190_18_10 16510 17232 + 3.A.1.3.25
Gene ID: HRGMv2_3190_18_1
Type: TC
Location: 1 - 1599 (+)
Gene ID: HRGMv2_3190_18_2
Type: pfam
Location: 1626 - 3494 (+)
Gene ID: HRGMv2_3190_18_3
Type: TC
Location: 3461 - 4396 (+)
Gene ID: HRGMv2_3190_18_4
Type: pfam
Location: 4396 - 4623 (+)
Gene ID: HRGMv2_3190_18_5
Type: CAZyme
Location: 4661 - 6874 (+)
Gene ID: HRGMv2_3190_18_6
Type: CAZyme
Location: 7470 - 10706 (+)
Gene ID: HRGMv2_3190_18_7
Type: CAZyme
Location: 11245 - 14532 (+)
Gene ID: HRGMv2_3190_18_8
Type: TC
Location: 14869 - 15726 (+)
Gene ID: HRGMv2_3190_18_9
Type: TC
Location: 15822 - 16523 (+)
Gene ID: HRGMv2_3190_18_10
Type: TC
Location: 16510 - 17232 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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