Cluster: HRGMv2_3190_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3190
- CGC Family ID: CGCFAM_00169
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3190_10 | HRGMv2_3190_10_18 | 21725 | 24448 | - | 9.B.144.1.5 |
| pfam | HRGMv2_3190_10 | HRGMv2_3190_10_19 | 24441 | 25022 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_3190_10 | HRGMv2_3190_10_20 | 25006 | 25977 | - | GT2 |
| pfam | HRGMv2_3190_10 | HRGMv2_3190_10_21 | 26011 | 27120 | - | LytR_cpsA_psr |
| TC | HRGMv2_3190_10 | HRGMv2_3190_10_22 | 27384 | 28061 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_3190_10_18
Type: TC
Location: 21725 - 24448 (-)
Type: TC
Location: 21725 - 24448 (-)
Gene ID: HRGMv2_3190_10_19
Type: pfam
Location: 24441 - 25022 (-)
Type: pfam
Location: 24441 - 25022 (-)
Gene ID: HRGMv2_3190_10_20
Type: CAZyme
Location: 25006 - 25977 (-)
Type: CAZyme
Location: 25006 - 25977 (-)
Gene ID: HRGMv2_3190_10_21
Type: pfam
Location: 26011 - 27120 (-)
Type: pfam
Location: 26011 - 27120 (-)
Gene ID: HRGMv2_3190_10_22
Type: TC
Location: 27384 - 28061 (-)
Type: TC
Location: 27384 - 28061 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAUBKG01
Species
CAUBKG01 sp958436475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.