Cluster: HRGMv2_3190_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3190
- CGC Family ID: CGCFAM_10332
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3190_48 | HRGMv2_3190_48_1 | 540 | 4367 | + | CBM35 | GH87 |
| NULL(UNKNOWN) | HRGMv2_3190_48 | HRGMv2_3190_48_2 | 4312 | 4785 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3190_48 | HRGMv2_3190_48_3 | 4917 | 6296 | - | 2.A.38.4.3 |
| pfam | HRGMv2_3190_48 | HRGMv2_3190_48_4 | 6399 | 6950 | - | QueT |
| TC | HRGMv2_3190_48 | HRGMv2_3190_48_5 | 7116 | 8462 | - | 9.A.40.2.1 |
Gene ID: HRGMv2_3190_48_1
Type: CAZyme
Location: 540 - 4367 (+)
Type: CAZyme
Location: 540 - 4367 (+)
Gene ID: HRGMv2_3190_48_2
Type:
Location: 4312 - 4785 (-)
Type:
Location: 4312 - 4785 (-)
Gene ID: HRGMv2_3190_48_3
Type: TC
Location: 4917 - 6296 (-)
Type: TC
Location: 4917 - 6296 (-)
Gene ID: HRGMv2_3190_48_4
Type: pfam
Location: 6399 - 6950 (-)
Type: pfam
Location: 6399 - 6950 (-)
Gene ID: HRGMv2_3190_48_5
Type: TC
Location: 7116 - 8462 (-)
Type: TC
Location: 7116 - 8462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAUBKG01
Species
CAUBKG01 sp958436475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.