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Cluster: HRGMv2_3189_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3189_2 HRGMv2_3189_2_121 120615 122495 + GH13_9
pfam HRGMv2_3189_2 HRGMv2_3189_2_122 122509 123717 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3189_2 HRGMv2_3189_2_123 123720 124844 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3189_2 HRGMv2_3189_2_124 124863 126284 + GT5
pfam HRGMv2_3189_2 HRGMv2_3189_2_125 126452 128593 - S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
TC HRGMv2_3189_2 HRGMv2_3189_2_126 128598 129542 - 1.A.35.3.2
Gene ID: HRGMv2_3189_2_121
Type: CAZyme
Location: 120615 - 122495 (+)
Gene ID: HRGMv2_3189_2_122
Type: pfam
Location: 122509 - 123717 (+)
Gene ID: HRGMv2_3189_2_123
Type: pfam
Location: 123720 - 124844 (+)
Gene ID: HRGMv2_3189_2_124
Type: CAZyme
Location: 124863 - 126284 (+)
Gene ID: HRGMv2_3189_2_125
Type: pfam
Location: 126452 - 128593 (-)
Gene ID: HRGMv2_3189_2_126
Type: TC
Location: 128598 - 129542 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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